PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do013571.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bHLH
Protein Properties Length: 309aa    MW: 32265.7 Da    PI: 8.6819
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do013571.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.72.4e-14119170155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r++h ++Er+RR+ +N+ ++ Lr+l+P++   + ++ + a+++  A++Y+k+L+
  Do013571.1 119 QRMTHIAVERNRRRLMNDHLASLRSLIPSS---YIPRGDQATVVGGAIDYVKQLE 170
                 79****************************...9*******************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.14E-15110177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.51E-14117173No hitNo description
Gene3DG3DSA:4.10.280.102.2E-14117173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.154118169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-11119170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-9124175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MGVATTAAVM EQWADQQAAA TTSAAVAAAA QMPFLALLQG AGVMLEEGPQ DGRKRNAAAF  60
AADLDLLESC VTQAAAAAGA PVASAPATRA ERRRKRPRPR TRAAPPPEKR RKPEEAESQR  120
MTHIAVERNR RRLMNDHLAS LRSLIPSSYI PRGDQATVVG GAIDYVKQLE QQLVALQAAS  180
AARRGGAGAG VGTAATAASD GVFVSPQYAS YSEARGCCGG VDVEAMAAVG GHVRVRVAGR  240
RWPGRLVRAV AALEDLRLAV LHLAVTSVGH DAVVYCFNLK MEEGCEVATA DEVAAVVHQI  300
FAYAGGTCC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
191101RRRKRPRPRTR
29399RKRPRPR
393111RKRPRPRTRAAPPPEKRRK
49498KRPRP
5119130RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004985929.11e-141PREDICTED: transcription factor bHLH57-like isoform X3
TrEMBLK4AMX51e-146K4AMX5_SETIT; Uncharacterized protein
STRINGSi040271m1e-145(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP79573344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.13e-33bHLH family protein